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This list of publications, in high-impact
peer-reviewed journals, contains those by the SG members using
in-house SG facility. Publications from other works can
be found in respective faculty homepages.
From 2007:
1. Sumanta Basu,
Debasis Banerjee, Sarmila Chandra and Abhijit Chakrabarti.
Loss of phospholipid membrane asymmetry and sialylated
glycoconjugates from erythrocyte surface in HbEb-thalassemia.
(2008). Brit. J. Haematol. 141, 92-99.
2.
Majumder P, Choudhury A, Banerjee M, Lahiri A, Bhattacharyya
NP.Interactions of HIPPI, a molecular partner of Huntingtin
interacting protein HIP1, with the specific motif present at
the putative promoter sequence of the caspase-1, caspase-8 and
caspase-10 genes. FEBS J. 2007, 274(15):3886-99.
3. "HYPK, a huntingtin interacting
protein, reduces aggregates and apoptosis induced by
N-terminal huntingtin with 40 glutamines in Neuro2A cells and
exhibits chaperone like activity". Swasti Raychaudhuri, Mithun
Sinha, Debashis Mukhopadhyay, N.P. Bhattacharyya. Hum
Mol Genet. 2007 Oct 18; [Epub ahead of print]
4.
"Increased Caspase-2, Calpain
Activations and Decreased Mitochondrial Complex II Activity in
Cells Expressing Exogenous Huntingtin Exon 1 Containing CAG Repeat in the
Pathogenic Range". Pritha Majumder, Swasti Raychaudhuri,
Biswanath Chattopadhyay, N.P. Bhattacharyya. Cell Mol
Neurobiol. 2007 Sep 28; [Epub ahead of print]
5.
"Huntingtin interacting protein
HYPK is intrinsically unstructured". Swasti
Raychaudhuri, Pritha Majumder, Somosree Sarkar, Kalyan Giri,
Debashis Mukhopadhyay and Nitai P. Bhattacharyya. Proteins:
Structure, Function & Bioinformatics (2007); (In Press)
6.
"Membrane interactions of hemoglobin
variants, HbA, HbE, HbF and globin subunits of HbA : effects
of aminophospholipids and cholesterol". Poppy Datta,
Sudipa Chakrabarty, Amit Chakrabarty and Abhijit Chakrabarti.
Biochim. Biophys. Acta (2008).
Biochim. Biophys. Acta 1778, 1-9.
7.
"Spectrin
interactions of globin chains in presence of phosphate
metabolites and hydrogen peroxide: Implications in thalassemia".
Poppy Datta, Sudipa Chakrabarty, Amit Chakrabarty and Abhijit
Chakrabarti. J Biosci. 32 (2007); 1147-1151.
8.
"Pleiotropic p27 (kip1),BCR-ABL &
Leukemic Stem Cells: The trio in concert". Amitabha Sengupta &
Subrata Banerjee. Leukemia (2007) July 5 ; [Epub ahead of
print]
9. Banerjee M, Majumder P, Bhattacharyya NP, Dattagupta
JK, Sen U. (2006)
Cloning, expression, purification, crystallization and preliminary
crystallographic analysis of pseudo death-effector domain of HIPPI, a
molecular partner of Huntingtin-interacting protein HIP-1, Acta
Crystallograph Sect F Struct Biol Cryst Commun. 62, 1247-1250.
10. Dipankar Bhattacharyya, Debashis Mukhopadhyay and Abhijit
Chakrabarti.
Hemoglobin depletion from red blood cell cytosol reveals new
proteins in 2D gel based proteomics study. (2007).
Proteomics – Clinical Applications. 1, 561-564.
11. Sengupta A, Banerjee D, Chandra S, Banerji SK, Ghosh RN, Roy R, Banerjee
S. Deregulation and cross talk among Sonic hedgehog, Wnt, Hox and Notch
signaling in chronic myeloid leukemia progression. Leukemia (2007); 21: 949 -
955.
12. Raychaudhuri M.,
Mukhopadhyay D.,(2007) "AICD AND ITS ADAPTORS - IN SEARCH OF NEW PLAYERS", Journal of
Alzheimer's Disease, Volume 11, Number 3.
13. Majumder P, Chattopadhyay B, Sukanya
S, Ray T, Banerjee M, Mukhopadhyay D, Bhattacharyya NP
(2007) Interaction of HIPPI with putative promoter sequence of caspase-1
in vitro and in vivo.Biochem Biophys Res Commun , 353, 80-85.
During
Xth Plan Period:
1. Dasgupta J, Sen U,
Choudhury D, Datta P, Chakrabarti A, Chakrabarty SB,
Chakrabarty A, Dattagupta JK. (2003). Crystallization
and preliminary X-ray structural studies of Hemoglobin A2 and
Hemoglobin E, isolated from the blood samples of
b-thalassemic
patients. Biochem. Biophys.
Res. Commun. 303, 619-623.
2. Datta P, Chakrabarty SB,
Chakrabarty A, Chakrabarti
A. (2003). Interaction of erythroid spectrin with
hemoglobin variants : Implications in beta-Thalassemia.
Blood Cells Mol Dis.
30, 248-253.
3. Giri K, Ghosh U, Bhattacharyya
NP, Basak, S. (2003). Caspase 8 mediated apoptotic cell
death induced by beta-sheet forming polyalanine peptides.
FEBS Lett.
555, 380-384.
4. B Chattopadhyay, P Basu, PK
Gangopadhyay, SC Mukherjee, KK Sinha, A Chakraborty, T Roy, S
Roychoudhury, PP Majumder, NP Bhattacharyya. (2003).
Variation of CAG repeats and two intragenic polymorphisms at
SCA3 locus among Machado-Joseph disease/SCA3 patients and
diverse normal populations from eastern India.
Acta Neurol Scand.
108, 407-414.
5. Chattopadhyay B, Ghosh S,
Gangopadhyay PK, Das SK, Roy T, Sinha KK, Jha DK, Mukherjee
SC, Chakraborty A, Singhal BS, Bhattacharya AK,
Bhattacharyya NP. (2003). Modulation of age at onset in
Huntington's disease and spinocerebellar ataxia type 2
patients originated from eastern India.
Neurosci Lett.
345, 93-96.
6. Basu U, Banerjee
S. (2004). An engineered EBV vector expressing human
factor VIII and von Willebrand factor in cultured B-cells.
J Gene Med.
6, 760-768.
7. Sen U, Dasgupta J,
Choudhury D, Datta P, Chakrabarti A, Chakrabarty SB,
Chakrabarty A, Dattagupta JK. (2004). Crystal
structures of HbA2 and HbE and modeling of hemoglobin
d4 :
interpretations of the thermal stability and antisickling
effect of HbA2 and identification of the ferrocyanide binding
site in Hb. Biochemistry,
43, 12477-12488.
8. Biswanath Chattopadhyay, Sabari
Gupta, Prasanta K Gangopadhyay, Shyamal K Das, T Roy, Subhash
C Mukherjee, Krishna K Sinha, Bhim Singhal, Nitai P
Bhattacharyya. (2004). Molecular analysis of GAA repeats
and four linked biallelic markers in and around frataxin gene
among patients and normal populations from India.
Annals of Human genetics,
68, 189-195.
9.
Chattopadhyay
B, Baksi K, Mukhopadhyay S, Bhattacharyya NP. (2005).
Modulation of age at onset of Huntington disease patients by
variations in TP53 and human caspase activated DNase (hCAD)
genes. Neurosci Lett. 374, 81-86.
10.
Baksi K, Bhattacharyya NP. (2005). Substitution of
polymorphic amino acids in proteins : Predicting functional
alterations using amino acid properties.
Online Journal of Bioinformatics,
6, 42-50.
11. Dutta N, Majumder D, Gupta A,
Mazumder DN, Banerjee S. (2005). Analysis of human
lymphocyte antigen class I expression in gastric cancer by
reverse transcriptase-polymerase chain reaction.
Hum Immunol.
66, 164 - 169.
12. Majumdar D, Bandyopadhyay D,
Chandra S, Mukhopadhyay A, Mukherjee N, Bandyopadhyay S,
Banerjee S. (2005). Analysis of HLA class Ia transcripts
in human leukemias.
Immunogenetics. 57, 579 - 589.
13. Majumdar D, Bandyopadhyay D,
Chandra S, Mukherjee N, Banerjee S. (2006). Lack of HLA-E
surface expression is due to deficiency of HLA-E transcripts
in the malignant haematopoietic cells of leukemic patients.
Leukemia Res.
30, 242 - 245.
14. Dutta N, Gupta A, Mazumder DN,
Banerjee
S. (2006). Down-regulation of locus-specific human
lymphocyte antigen class I expression in Epstein-Barr
virus-associated gastric cancer: implication for viral-induced
immune evasion. Cancer
106, 1685-93.
15. Majumdar P, Chattopadhyay B,
Mazumder A, Das P, Bhattacharyya NP. (2006). Induction
of apoptosis in cells expressing exogenous Hippi, a molecular
partner of huntingtin-interacting protein Hip1.
Neurobiol
Dis. 22, 242-256.
16. Sengupta, A., Bandyopadhyay D,
Chandra S, Banerjee S. (2006). Gene therapy for BCR-ABL+
human CML with stable RNA interference and p27 using an EBV
vector J. Gene Med.
8:1251-1261.
17. Durjoy Majumdar, Debasis
Banerjee, Sharmila Chandra Subir Banerjee & Abhijit
Chakrabarti. (2006). Red Cell Morphology in Leukemia,
Hypoplastic Anemia and Myelodysplastic Syndrome.
Pathophysiology. 13, 217-225.
18. Poppy Datta, Sumanta Basu,
Sudipa Basu Chakrabarty, Amit Chakrabarty, Debasis Banerjee,
Sharmila Chandra & Abhijit Chakrabarti. (2006).
Enhanced oxidative cross-linking of hemoglobin E with spectrin
and loss of erythrocyte membrane asymmetry in hemoglobin
Eb-Thalassemia. Blood Cells, Molecules & Diseases. 37,
77-81.
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