This list of publications, in high-impact peer-reviewed journals, contains those by the SG members using in-house SG facility. Publications from other works can be found in respective faculty homepages.

From 2007:

1. Sumanta Basu, Debasis Banerjee, Sarmila Chandra and Abhijit Chakrabarti. Loss of phospholipid membrane asymmetry and sialylated glycoconjugates from erythrocyte surface in HbEb-thalassemia. (2008). Brit. J. Haematol. 141, 92-99. 

2. Majumder P, Choudhury A, Banerjee M, Lahiri A, Bhattacharyya NP.Interactions of HIPPI, a molecular partner of Huntingtin interacting protein HIP1, with the specific motif present at the putative promoter sequence of the caspase-1, caspase-8 and caspase-10 genes. FEBS J. 2007, 274(15):3886-99.

3. "HYPK, a huntingtin interacting protein, reduces aggregates and apoptosis induced by N-terminal huntingtin with 40 glutamines in Neuro2A cells and exhibits chaperone like activity". Swasti Raychaudhuri, Mithun Sinha,  Debashis Mukhopadhyay, N.P. Bhattacharyya. Hum Mol Genet. 2007 Oct 18; [Epub ahead of print]

4. "Increased Caspase-2, Calpain Activations and Decreased Mitochondrial Complex II Activity in Cells Expressing Exogenous Huntingtin Exon 1 Containing CAG Repeat in the Pathogenic Range". Pritha Majumder, Swasti Raychaudhuri, Biswanath Chattopadhyay, N.P. Bhattacharyya. Cell Mol Neurobiol. 2007 Sep 28; [Epub ahead of print]

5. "Huntingtin interacting protein HYPK is intrinsically unstructured". Swasti Raychaudhuri, Pritha Majumder, Somosree Sarkar, Kalyan Giri, Debashis Mukhopadhyay and Nitai P. Bhattacharyya. Proteins: Structure, Function & Bioinformatics (2007); (In Press)

6. "Membrane interactions of hemoglobin variants, HbA, HbE, HbF and globin subunits of HbA : effects of  aminophospholipids and cholesterol". Poppy Datta, Sudipa Chakrabarty, Amit Chakrabarty and Abhijit Chakrabarti. Biochim. Biophys. Acta (2008). Biochim. Biophys. Acta 1778, 1-9.

7. "Spectrin interactions of globin chains in presence of phosphate metabolites and hydrogen peroxide: Implications in thalassemia". Poppy Datta, Sudipa Chakrabarty, Amit Chakrabarty and Abhijit Chakrabarti. J Biosci. 32 (2007); 1147-1151.

8. "Pleiotropic p27 (kip1),BCR-ABL & Leukemic Stem Cells: The trio in concert". Amitabha Sengupta & Subrata Banerjee. Leukemia (2007) July 5 ; [Epub ahead of print]

9. Banerjee M, Majumder P, Bhattacharyya NP, Dattagupta JK, Sen U. (2006) Cloning, expression, purification, crystallization and preliminary crystallographic analysis of pseudo death-effector domain of HIPPI, a molecular partner of Huntingtin-interacting protein HIP-1, Acta Crystallograph Sect F Struct Biol Cryst Commun. 62, 1247-1250.

10. Dipankar Bhattacharyya, Debashis Mukhopadhyay and Abhijit Chakrabarti.  Hemoglobin depletion from red blood cell cytosol reveals new proteins in 2D gel based proteomics study.  (2007). Proteomics – Clinical Applications.  1, 561-564.

11. Sengupta A, Banerjee D, Chandra S, Banerji SK, Ghosh RN, Roy R, Banerjee S. Deregulation and cross talk among Sonic hedgehog, Wnt, Hox and Notch signaling in chronic myeloid leukemia progression. Leukemia (2007); 21: 949 - 955.

12. Raychaudhuri M., Mukhopadhyay D.,(2007) "AICD AND ITS ADAPTORS - IN SEARCH OF NEW PLAYERS", Journal of Alzheimer's Disease, Volume 11, Number 3.

13. Majumder P, Chattopadhyay B, Sukanya S, Ray T, Banerjee M, Mukhopadhyay D,  Bhattacharyya NP  (2007) Interaction of HIPPI with putative promoter sequence of caspase-1 in vitro and in vivo.Biochem Biophys Res Commun , 353, 80-85.

 

During Xth Plan Period:

 1. Dasgupta J, Sen U, Choudhury D, Datta P, Chakrabarti A, Chakrabarty SB, Chakrabarty A, Dattagupta JK. (2003). Crystallization and preliminary X-ray structural studies of Hemoglobin A2 and Hemoglobin E, isolated from the blood samples of b-thalassemic patients. Biochem. Biophys. Res. Commun. 303, 619-623. 

 2. Datta P, Chakrabarty SB, Chakrabarty A, Chakrabarti A. (2003). Interaction of erythroid spectrin with hemoglobin variants : Implications in beta-Thalassemia. Blood Cells Mol Dis. 30, 248-253. 

 3. Giri K, Ghosh U, Bhattacharyya NP, Basak, S. (2003). Caspase 8 mediated apoptotic cell death induced by beta-sheet forming polyalanine peptides. FEBS Lett. 555, 380-384. 

 4. B Chattopadhyay, P Basu, PK Gangopadhyay, SC Mukherjee, KK Sinha, A Chakraborty, T Roy, S Roychoudhury, PP Majumder, NP Bhattacharyya. (2003). Variation of CAG repeats and two intragenic polymorphisms at SCA3 locus among Machado-Joseph disease/SCA3 patients and diverse normal populations from eastern India. Acta Neurol Scand. 108, 407-414. 

 5. Chattopadhyay B, Ghosh S, Gangopadhyay PK, Das SK, Roy T, Sinha KK, Jha DK, Mukherjee SC, Chakraborty A, Singhal BS, Bhattacharya AK, Bhattacharyya NP. (2003). Modulation of age at onset in Huntington's disease and spinocerebellar ataxia type 2 patients originated from eastern India. Neurosci Lett. 345, 93-96. 

 6. Basu U, Banerjee S. (2004). An engineered EBV vector expressing human factor VIII and von Willebrand factor in cultured B-cells. J Gene Med. 6, 760-768. 

 7. Sen U, Dasgupta J, Choudhury D, Datta P, Chakrabarti A, Chakrabarty SB, Chakrabarty A, Dattagupta JK. (2004). Crystal structures of HbA2 and HbE and modeling of hemoglobin d4 : interpretations of the thermal stability and antisickling effect of HbA2 and identification of the ferrocyanide binding site in Hb. Biochemistry, 43, 12477-12488. 

 8. Biswanath Chattopadhyay, Sabari Gupta, Prasanta K Gangopadhyay, Shyamal K Das, T Roy, Subhash C Mukherjee, Krishna K Sinha, Bhim Singhal, Nitai P Bhattacharyya. (2004). Molecular analysis of GAA repeats and four linked biallelic markers in and around frataxin gene among patients and normal populations from India. Annals of Human genetics, 68, 189-195. 

 9. Chattopadhyay B, Baksi K, Mukhopadhyay S, Bhattacharyya NP. (2005). Modulation of age at onset of Huntington disease patients by variations in TP53 and human caspase activated DNase (hCAD) genes. Neurosci Lett. 374, 81-86. 

 10. Baksi K, Bhattacharyya NP. (2005). Substitution of polymorphic amino acids in proteins : Predicting functional alterations using amino acid properties. Online Journal of Bioinformatics, 6, 42-50.

 11. Dutta N, Majumder D, Gupta A, Mazumder DN, Banerjee S. (2005). Analysis of human lymphocyte antigen class I expression in gastric cancer by reverse transcriptase-polymerase chain reaction. Hum Immunol. 66, 164 - 169.

 12. Majumdar D, Bandyopadhyay D, Chandra S, Mukhopadhyay A, Mukherjee N, Bandyopadhyay S, Banerjee S. (2005). Analysis of HLA class Ia transcripts in human leukemias. Immunogenetics. 57, 579 - 589. 

 13. Majumdar D, Bandyopadhyay D, Chandra S, Mukherjee N, Banerjee S. (2006). Lack of HLA-E surface expression is due to deficiency of HLA-E transcripts in the malignant haematopoietic cells of leukemic patients. Leukemia Res. 30, 242 - 245. 

 14. Dutta N, Gupta A, Mazumder DN, Banerjee S. (2006). Down-regulation of locus-specific human lymphocyte antigen class I expression in Epstein-Barr virus-associated gastric cancer: implication for viral-induced immune evasion. Cancer 106, 1685-93.  

 15. Majumdar P, Chattopadhyay B, Mazumder A, Das P, Bhattacharyya NP. (2006). Induction of apoptosis in cells expressing exogenous Hippi, a molecular partner of huntingtin-interacting protein Hip1. Neurobiol Dis. 22, 242-256.  

16. Sengupta, A., Bandyopadhyay D, Chandra S, Banerjee S. (2006). Gene therapy for BCR-ABL+ human CML with stable RNA interference and p27 using an EBV vector J. Gene Med. 8:1251-1261. 

17. Durjoy Majumdar, Debasis Banerjee, Sharmila Chandra Subir Banerjee & Abhijit Chakrabarti. (2006). Red Cell Morphology in Leukemia, Hypoplastic Anemia and Myelodysplastic Syndrome. Pathophysiology. 13, 217-225.

18. Poppy Datta, Sumanta Basu, Sudipa Basu Chakrabarty, Amit Chakrabarty, Debasis Banerjee, Sharmila Chandra & Abhijit Chakrabarti. (2006). Enhanced oxidative cross-linking of hemoglobin E with spectrin and loss of erythrocyte membrane asymmetry in hemoglobin Eb-Thalassemia. Blood Cells, Molecules & Diseases. 37, 77-81.

 


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